FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010813

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010813
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences892560
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTGTCTA5601.8293597E-411.5537929
CTTGAAT7853.5562532E-49.2601891
TTTAATC9703.5890596E-48.152962
CTTCAAG10350.0054465127.0234281
CTTAAAA10700.00751679626.79368971
CTTTAAT12550.00489939336.3714521
CTGGAAC12700.005544756.2961991
Produced by FastQC (version 0.11.5)