FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010841

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010841
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1170732
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC7907.8216544E-1114.589073
CCGATCT7759.1495167E-1013.9419764
CTTCCGA14150.012.7945571
CACGTCT4755.899506E-412.1278199
CACACGT4450.00499489911.3272477
GCACACG6658.8113296E-49.7455686
TTCCGAT17804.5420165E-87.69587762
Produced by FastQC (version 0.11.5)