FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005010859

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010859
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50111188
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAACTTAGAATGCAACTCCTT5306301.0589052488637867No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAACT3013460.6013547314024964No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAACTTAGAATGCAACTCCT2000130.3991384119650087No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAACTTAGAAT695500.13879136132234582No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAACTTAGAATGC672550.13421154573306063No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAACTTAG558900.11153197964494477No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)