FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010863

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010863
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1198399
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTCGG7201.6397284E-410.0020361
TCAATCG8004.8528973E-48.9774173
GTCCCTG8105.346613E-48.8906991
CTCAAAT10450.0065512756.89135551
CCAGCCT10800.0092531226.64938358
GTTTTAA13050.0081079996.07020141
CGAAAAG18051.8079979E-45.98459861
CTTCTCC22807.559351E-45.0536611
Produced by FastQC (version 0.11.5)