FastQCFastQC Report
Thu 12 May 2022
EGAF00005010865

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010865
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44932770
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAACTATCGCCTACAACTCCTT1469740.32709757266244655No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAACTATCGCCTACAACTCCT1057940.23544953938962587No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAACTATCGCCTACAACTCCT552660.12299709098726833No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAACTA531200.11822106671812133No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)