FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010885

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010885
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences996150
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAAAGA9300.002698027.54813241
CTTCGAT11750.00354707456.57169251
CTCCGCC21501.9292802E-66.2035111
TCGATCT12500.00689211676.16591933
CTGGAAG16850.00425461355.41584061
CTGAAAA20300.00124428565.18701651
Produced by FastQC (version 0.11.5)