FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010913

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010913
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1150469
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG6600.0087425858.7657431
CATAGAT12556.8309746E-46.9148091
CGAACTG10600.00751514976.7942264
CGATAAT12400.0045644226.41525171
GACTTTC13250.0094816335.9789195
CTTTGAC17050.00344354155.5139351
TCAAATC20459.614219E-45.28852842
Produced by FastQC (version 0.11.5)