FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496629
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACACTC1950.007481409218.3012055
CAAACAT4552.6686372E-514.188071
CTTTGAC7150.00176681019.0287711
TTTTGAC6400.00755287438.9218377
ATCCACC6450.0080504068.8526756
AAATAAA13350.00159269486.41570335
GACAGTC3050.00706644645.616369770-74
Produced by FastQC (version 0.11.5)