FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010919

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010919
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences581772
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCAAGC3700.001620795313.1611312
CCAGAAT7403.0588056E-49.3991923
CTGAAAT7955.990103E-48.7882141
CACGGCC7650.0041384368.2195641
CAAAAAA15250.00137150885.9558161
CTTGGGC3050.0093007475.47809540-44
Produced by FastQC (version 0.11.5)