FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1044673
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAAACT6950.00209737158.8619663
GATTTAA8350.00119995778.1956975
CTACAAT7800.00567268867.93764971
TCATATT13700.0034247245.9942254
CTTTGAT15050.00141300135.942251
ATATTCC20353.115341E-45.38056566
GTTCCAG19150.0043532775.02925061
Produced by FastQC (version 0.11.5)