FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010982

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010982
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1050551
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCAAT7800.00384153088.2889661
TAAAGAC9700.00325021457.4059491
GTTTTCT18509.543692E-87.3779271
TTAAAAC11200.00171925537.0400322
CCTGAAT10750.0088172596.68257761
CTTCCAA12150.00395455546.5038251
CTTTCAA18100.00124632795.55650761
Produced by FastQC (version 0.11.5)