FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010995

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010995
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences569641
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGTG1850.0052792919.4408576
GTCATAG3950.001784614512.9937081
TAGCAGA4650.006985882310.82644759
CAAGGAT7600.00299813768.5181653
CTTAAAA7750.00300878388.5147711
CTTCCAA8600.0076743247.6731951
CTTCAAT10300.0047721877.11860561
AACAATA10600.0075837756.7865552
CTCTTTT14700.0034731655.985441
GCACGGA4353.9194254E-45.295330-34
Produced by FastQC (version 0.11.5)