FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011020

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011020
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1165315
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACGA6003.0434094E-410.9375031
CAAATCT9550.00269667017.54875953
CTTTTGT16956.417376E-56.45280361
CTGCCGA15459.6254685E-46.1353851
CTTTTAC16550.00219333925.7275951
CTTCAGC17400.00397113665.44779831
CAAAAAA30551.3054181E-55.01227661
Produced by FastQC (version 0.11.5)