FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011033

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011033
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1261159
Sequences flagged as poor quality0
Sequence length100-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTACCT3900.006063743513.954574145
CCTCGCT11850.00276804556.7292411
CAGATTT13900.00221244466.2330133
CCAAAAT14250.0027940416.1046131
CTTTGAA18301.9936489E-45.941991
TGACCAT14600.00383858485.93346365
CTGAAAT15700.0081959035.5408111
ATTTTGT19000.00216423145.31887676
Produced by FastQC (version 0.11.5)