FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011058

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011058
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences966816
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCTAA3000.005036223714.350735
CCCAGTA4550.00527051411.2455491
CCCAAAT8901.1814521E-49.0343461
CGTTATT8100.00461502758.1217861
CTATCAG11350.00160879937.08420131
CTTCAAG13700.00163439816.40257551
GTAAAGA13100.0072252786.13783841
TTTGCCA18500.00166687035.43000567
AAGATTT19300.00283676185.2049283
Produced by FastQC (version 0.11.5)