FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011061

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011061
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1509260
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTGGGGG5209.712459E-512.3671457
CGCGACT4800.009233491510.4287563
CCCACTT7050.0015689859.1497531
CTCAGAA11150.00164274037.0708851
GTGCAAT10500.0071866476.82600641
ATTAAAC12350.00480665136.3838361
CTTCGAT14100.0028196786.09983541
CTTGGAA15450.00118456046.0307431
GTTTCTG17750.0061479615.24929481
ATTTCGG19550.003383015.1325981
AAATACC19750.0039891785.0651376
Produced by FastQC (version 0.11.5)