FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences689472
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCCTAC2450.001264922217.6518369
TTCGAGA4653.1213996E-513.9557062
TACCCTG4200.003217385412.0130559
CCTTGAT9904.131143E-69.5165971
TCGAGAA7652.9892812E-49.421323
ATTTACC7250.00192126748.9470056
GTCAGCT7500.00248589188.6967051
Produced by FastQC (version 0.11.5)