FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011118

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011118
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1175027
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTTGT10357.329158E-58.3894511
CTTCAAT20856.763712E-76.5938681
CAGGTTT12450.004949216.3656873
AACTATT12900.00712065546.14676762
CTTTAAT20651.7324359E-45.606511
CTTTGAT24807.6510274E-55.25186441
CCTCTTT24152.8927688E-45.09359551
AAATTGT19850.00382997935.0814716
Produced by FastQC (version 0.11.5)