FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011143

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011143
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496103
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC600.00600031913.97788965-69
AATCGCT3200.00920633813.0989887
ATTGGCC2950.00617745159.4727136
CTTTCCT6300.0076679918.9053781
CTTCCAG7950.00565195747.9392291
Produced by FastQC (version 0.11.5)