FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences839531
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTAATT10055.889669E-47.78525162
GTAAGAA8450.0084201857.59487441
AAATTGT10600.0085122426.70667464
CAAAGAA24708.432835E-96.63996361
CAAAGAT15652.1228733E-46.37893961
GTGAAAA15150.0066256255.64811371
Produced by FastQC (version 0.11.5)