FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1220066
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTACG11150.0075173897.6920033145
CTTAAAT13200.00117416.59310441
CTCGGCG13200.00117416.59310441
GTCAAGA12650.005455756.3064481
CAAGATA15450.00719177635.6068544
CTTTAAT19200.00232687135.28821951
CTTTGAA28702.6037367E-55.0539481
Produced by FastQC (version 0.11.5)