FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011163

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011163
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1010750
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCATGA7600.00278643038.5886551
CACAAAT10205.606848E-47.82147741
CTTTCAG16305.2638825E-67.11915871
AATCCTG11250.00166249947.0623555
CTTTTTA21551.6100421E-76.7309911
AGGAACT12800.00641530156.20868353
Produced by FastQC (version 0.11.5)