FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011166

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011166
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491707
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCTAT3650.001071782413.9022011
GTTTGAA5850.0031695899.913171
ACATTCA5900.00348509489.8001624
CTTTTGT8400.00688204877.7667911
TCCGGAT8650.0091764627.5208312
Produced by FastQC (version 0.11.5)