FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences905186
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGAT5952.9441004E-410.9762191
CCAAGTT4900.00964759810.3664291
GGGTGAT6700.0096111738.6644781
CTTTTGG11301.9666439E-47.7060181
CTTCCAT12707.517453E-46.8565361
CTTCAAT13300.00126964966.5472191
CTTTGCC17150.00354123845.5005541
Produced by FastQC (version 0.11.5)