FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011235

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011235
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475482
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAACCT3750.001357957813.472968
GGTATAT4150.002832158212.2180481
CCCCCCC1655.8973546E-59.62941645-49
CTTTGAA8105.0302816E-48.9426621
GTTTGTG3354.285012E-46.46697435
GGCATGC3100.00745687035.58903965-69
Produced by FastQC (version 0.11.5)