FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011261

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011261
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1721816
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGACT5600.002298377710.3075861
TACGAAG12658.090584E-46.8133579
CCCAAAA17058.06021E-56.34777931
CCCGCAT15600.00122813256.01275831
GTTGATA17100.00385395045.46205952
CTCAAAA20950.00131526345.1660931
GGTAAAT18250.0078706165.13967231
CTTCGAT18400.0086587695.09777361
Produced by FastQC (version 0.11.5)