Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005011271 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 533202 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CACACGT | 175 | 1.3626413E-7 | 32.023087 | 7 |
ACACGTC | 250 | 3.0676147E-6 | 22.416157 | 8 |
GAGCACA | 240 | 5.67053E-5 | 20.435226 | 4 |
CACGTCT | 305 | 1.7119399E-5 | 18.373901 | 9 |
GCACACG | 300 | 3.1333847E-4 | 16.348183 | 6 |
AGCACAC | 345 | 9.056297E-4 | 14.21581 | 5 |
AGAGCAC | 350 | 0.0010097292 | 14.012728 | 3 |
GAAGAGC | 600 | 4.2614917E-4 | 10.544159 | 1 |
AAGAGCA | 585 | 0.0041621053 | 9.592148 | 2 |
CCAGAAT | 970 | 4.5625455E-4 | 7.971529 | 1 |