FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011280

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011280
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences547661
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCAAAG6103.608217E-410.7359241
TCAAAGG6557.5263623E-49.9125112
ACTTCCA6759.908114E-49.6196854
CTTTGAT10255.69112E-47.80900241
CTTATTT9800.0031633547.42507121
CTTTTTA13059.903014E-46.69109961
CTTTTAA12200.00360161186.56084251
TTTTGCA15900.00154332695.8972487
Produced by FastQC (version 0.11.5)