FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011317

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011317
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1136046
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATCCC3000.00483898114.437686
AACGAAT10004.7639987E-47.9414232
CAATCGC8250.00609102157.8750986
GTTGAAT9500.00242363667.63136051
AGATTCA11900.00302301866.67287734
ATATATA21653.5173306E-45.334946
CAAGAAA21600.00184941065.03457831
Produced by FastQC (version 0.11.5)