FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences657550
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCCTT2600.00382569320.552134145
CTTAAAA7350.00262587178.6441881
TATTCCT10250.00688796776.8547697
CAAAATC13900.00299501566.06573154
TTAAAAA15400.0091068855.48701332
Produced by FastQC (version 0.11.5)