FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences513472
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCCGA3706.709825E-515.6686761
GATCAAT4753.6336365E-513.7307091
CTCAGAA4100.002577967212.3725221
CTTCTAT6455.02989E-511.23529151
GTTCAAA5750.002754942310.0824531
ATTCCGT7500.00248509258.6961161
CTTCAAT8457.6354266E-48.5760521
Produced by FastQC (version 0.11.5)