FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011354

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011354
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1044283
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT4800.00753816510.7174251
CTCTGCT10650.0064653016.9005561
CTTAAAT10700.0067652686.86831051
TTCAACT11750.0026794496.7498487
CAAGAAA21452.3882995E-45.481841
TCAAAAT25059.474813E-55.18088443
CTTCAAA21500.00145163365.1272731
Produced by FastQC (version 0.11.5)