FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3970224
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT11600.00229822246.85016069
CCCAAAT20101.7127979E-56.14015341
CTTGGAT27403.1806485E-75.82905961
GTCCGAA26606.846778E-65.45851761
CTAAAAC22605.977092E-45.1397021
Produced by FastQC (version 0.11.5)