FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1023480
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCACTA4350.00414220711.61477852
CCCAAAT8407.298014E-48.6170191
GTTAAAA8300.006275757.8487541
CAACGAT10000.0040639637.2382961
CCAATGA11900.00307401856.6620964
ATCCATC12850.00674692876.1786232
GCAAAGA20200.0046521265.00240472
Produced by FastQC (version 0.11.5)