FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences841463
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCAGT5450.001881810810.557311
CTCAAAG8100.00533744557.99129771
GTTTGTT10550.00726876736.817221
CTTCTGC18803.1982112E-45.73843151
TAAAAGA16450.00247848855.66855242
Produced by FastQC (version 0.11.5)