FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011405

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011405
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences677239
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGTTAG2850.00404607614.8306416
CATCGAT4700.00854962710.5362311
AATAACC6900.00150738419.188556
CCATGTT6400.0081298288.8429091
ATCAGAT10400.0074206296.80223751
AAAGATT14607.350516E-46.27301172
Produced by FastQC (version 0.11.5)