FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011427

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011427
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1463595
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTGAT10450.0063963266.90862941
CTTCGAT14400.00328971386.0162651
CCACCGC15700.00131630265.9779451
GTTTTAC14650.00398588835.91359761
CACCAAA14650.00398588835.91359761
CACAAAA24002.7294457E-45.11382531
GTTTCAT22907.7660405E-45.04420471
Produced by FastQC (version 0.11.5)