FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011447

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011447
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences593485
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTCT3103.1153884E-416.3610461
CTAAAAT5556.8576446E-714.36066151
CCAGATC8400.00702059137.75006632
CTTTTTT23501.1384509E-76.47479721
Produced by FastQC (version 0.11.5)