FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2622965
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAT15850.00143229845.9364551
CCCGCAT18552.4545795E-45.8527561
CCCCGGA18000.00105850185.6294841
CTTCGGA25954.670679E-65.57834961
CCCGGAC18200.00121771135.5676221
CCCATGG17150.00365860155.4864611
GTTCGAT17200.00378658485.47051141
CTCCTTT50151.8189894E-115.1957071
CCCAGAT21000.00130337885.16993431
CTATTAC19700.0034580775.12398246
TCGATCT21450.00181696025.0420813
Produced by FastQC (version 0.11.5)