FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011469

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011469
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences723093
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACTAT3254.5421757E-415.5711763
AGCGATC2800.003026999315.4917314
TCCCACT4150.002876283612.1942946
CTTACAA4907.141465E-411.854051
CGTAGAT4500.005101373411.2942761
CTCAAAG5650.002346316110.2805031
CTTCTTT25300.08.0354531
CTTCCTT12701.06700045E-58.0038171
CTTTGAA12306.2063424E-57.6738111
CTTTTGA12750.00584436866.2640521
CTTTGAT12800.0060870356.2395831
CTTTCTT21252.4789487E-45.46680931
Produced by FastQC (version 0.11.5)