FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005011477

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011477
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35839297
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAAAGACCTCTACAACTCCTT5187711.4474921201718884No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAAAGACCTCTACAACTCCT4713871.3152797054027037No Hit
TTGTCTTCCTAAGGAACGACATGGCTACGAT984780.2747765950877887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)