FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005011487

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011487
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63398168
Sequences flagged as poor quality0
Sequence length30-100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATCGGAAGGCACAACTCCTT5173790.8160787863775496No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATCGGAAGGCACAACTCCT3449640.5441229784431626No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAATCGGAAGGCACAACTCCT1375510.21696368260988233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)