FastQCFastQC Report
Mon 13 May 2024
EGAF00005011498

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011498
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59046652
Total Bases5.5 Gbp
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGGCTAATACCAACTCCTT2363960.40035462129165256No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGGCTAATACCAACTCCT747710.12663038033045465No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)