FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011500

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011500
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504270
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAGA4604.3119348E-412.5851691
CTTCCAT7500.0025172688.6837661
TTTCAAC7600.00288976248.5524992
ATTTGAT12356.788662E-57.6173391
AAAGATT11602.8072007E-47.47040654
CTTTTTC21150.00142724045.13225031
Produced by FastQC (version 0.11.5)