FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011522

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011522
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1531991
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAAGAT11550.00223892446.86652851
CTTCGAT15953.2294934E-56.7804281
CCTCAAT12750.00629735926.2202671
CATTCAT17507.7638426E-45.76788431
ATTGAAC15800.0093350965.47583871
CCTTGCC22409.904403E-55.47176461
Produced by FastQC (version 0.11.5)