FastQCFastQC Report
Thu 12 May 2022
EGAF00005011529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41250022
Sequences flagged as poor quality0
Sequence length30-100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGCTTCGGTACAACTCCTT2491380.6039705869732628No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGCTTCGGTACAACTCCT1087240.26357319276096386No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)