FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences813373
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGC4604.5239268E-412.5154736
CCCAGCT6800.00103306549.5770421
TCCAGTA6350.00662749459.0663277
CTAAAAT8256.115651E-48.7708931
CCCAGAA8400.00700362357.7528441
CTTGAAA15904.5479646E-77.736591
CTCAAAA11750.0025784586.77411561
CTTTTGA12000.0032164476.63298851
CTTCTGT12750.0060566146.24281261
CTGAAAA20201.2600308E-45.73147541
CAAAAAG17750.005487695.29959631
AACAAAA21753.884239E-45.29715822
TTAAAAA20100.0044996495.0154992
Produced by FastQC (version 0.11.5)