FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1005482
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAAC5651.8579431E-411.5348251
TCCGATT10005.1113646E-58.6515212
CTTTAAA15151.8024748E-67.6475851
CCCATTT10850.00110227847.3414171
CTTCGAT10000.00404736737.2413071
CCCAGCA11250.00161820827.0803891
CAACAAT13351.7684847E-47.051461
AAGATAC10500.00682036446.862535
CTCAAAG10600.0071268046.8314221
CCTTTGA13000.00100427426.68428331
CTTTTAC13150.00114381056.60803651
CTTTGAT16302.947384E-46.21952721
GATGCCC12900.0071435236.14466437
AAAGATA21756.388801E-55.63200764
GCGCGTT4751.8549603E-45.2487755125-129
Produced by FastQC (version 0.11.5)