FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011607

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011607
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1008422
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2902.0776849E-417.2549657
ACACGTC3754.4184217E-617.1563648
ACTAATT4250.00374153911.7739747
GTTTTAA10206.203484E-47.74795151
CCCAGCT8400.00746939247.69764041
AGAGCAC8500.008645667.57273863
CACCGAT11400.00202288466.93237831
GGCAAAT14500.00374888165.94576361
Produced by FastQC (version 0.11.5)