FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences624269
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATCTAG650.005623196314.115567140-144
CTTCAAT8205.8701454E-48.8062981
TTCAATC6600.0090799618.72415352
ATTTTGG6650.009677178.6564766
CAAACTG7500.00265140068.6348343
GTTTATT8000.00460014638.1238111
ATTTTCC13400.00151755296.4439066
Produced by FastQC (version 0.11.5)